Bioinformatics and Genetics (English)
Bachelor TR-NQF-HE: Level 6 QF-EHEA: First Cycle EQF-LLL: Level 6

Course Introduction and Application Information

Course Code: CHEM211
Course Name: Principles of Organic Chemistry 1
Semester: Fall
Course Credits:
ECTS
5
Language of instruction: English
Course Condition:
Does the Course Require Work Experience?: No
Type of course: Compulsory Courses
Course Level:
Bachelor TR-NQF-HE:6. Master`s Degree QF-EHEA:First Cycle EQF-LLL:6. Master`s Degree
Mode of Delivery: Face to face
Course Coordinator: Dr. Öğr. Üy. MELİKE ATAKOL
Course Lecturer(s): Çiğdem Bilici
Course Assistants:

Course Objective and Content

Course Objectives: To teach the basic concepts and principles of organic chemistry; To give theoretical and practical information together; To develop the ability to solve organic problems and make critical decisions; To give importance of organic chemistry in daily life; To help students think positively, logically and understand the importance of organic chemistry for engineering.
Course Content: Atomic and molecular Orbitals, hybridization, molecular geometry, Resonance and inductive effect, acid base, dipole moment, Saturated Hydrocarbons (Alkane, Cycloalkane and conformation), Unsaturated hydrocarbons (Alkenes, Alkynes), Alcohols and Ethers

Learning Outcomes

The students who have succeeded in this course;
1) Learns the basic concepts and principles of organic chemistry, puts theoretical knowledge into practice.
2) Develops the ability to solve organic problems and make critical decisions.
3) Learns the importance of organic chemistry in daily life and can put it into practice.
4) Students understand the importance of positive organic chemistry for industry.
5) Apply theoretical organic knowledge to positive sciences.

Course Flow Plan

Week Subject Related Preparation
1) Chemical bonding, fundamental concepts in organic chemistry
2) Chemical bonding, fundamental concepts in organic chemistry
3) Hybridization, molecular geometry, resonance, dipole examples
4) Alkanes and cycloalkanes, nomenclature of alkanes, their physical properties
5) Conformation of alkanes and cycloalkanes, their reactions
6) Stereochemistry
7) Problem Solving
8) Midterm
9) Nucleophilic Substitution- Alkyl Halides
10) Alkenes
11) Alkynes
12) Alcohols and Ethers
13) Alcohols and Ethers
14) Problem Solving
15) Final

Sources

Course Notes / Textbooks: Organic Chemistry, 3rd Edition, David R.Klein, 2017, Wiley.
References: Organic Chemistry, 12th Edition, T.W. Graham Solomons & Craig B. Fryhle, 2016, J.Wiley&Sons.
Organic Chemistry, 3rd Edition, Robert C. Atkins, Francis A. Carey, 2002, Mc Graw Hill.

Course - Program Learning Outcome Relationship

Course Learning Outcomes

1

2

3

4

5

Program Outcomes
1) Has theoretical and practical knowledge in mathematics, computer, statistics, genetics and programming, that is essence to be proficient in bioinformatics and genetics.
2) Has the basic ability to remodel, evaluate or simulate the fundamental research subjects such as molecular cell biology, genetic structure of the living organisms and understanding the modelling of evolution by using computer-based approaches.
3) Has the knowledge and ability to identify scientific problems in the field of bioinfomatics and genetics, to design and conduct experiments independently in the laboratory and digital environment, to collect data, analyze, draw conclusions, interpret and present data in oral and written fashion.
4) Has the skills of effective communication, planning, and decision making by taking responsibility in individual or teamwork.
5) Has the ability to produce output and useful models that offer original, creative and innovative solutions to problems by using inquiring, productive and entrepreneurial features effectively.
6) Has the habitude to examine the field of bioinformatics and genetics or other subjects overlaping with these fields with analytical and critical point of view and to follow them throughout life.
7) Has the ability to identify social problems, to create solutions through interdisciplinary cooperation in national and international social and scientific arenas, or be a part of the solution.
8) Has the ability to use software programs and information and communication technologies in data analysis and evaluation, at least at the European Computer License Basic Level.
9) Has the ability to use at least one foreign language orally and in writing at B1 General Level in terms of European Language Portfolio criteria.
10) Has the awareness to respect social, cultural, and individual differences, universal and ethical values, and human rights in the scientific and professional activities that is included.

Course - Learning Outcome Relationship

No Effect 1 Lowest 2 Average 3 Highest
       
Program Outcomes Level of Contribution
1) Has theoretical and practical knowledge in mathematics, computer, statistics, genetics and programming, that is essence to be proficient in bioinformatics and genetics.
2) Has the basic ability to remodel, evaluate or simulate the fundamental research subjects such as molecular cell biology, genetic structure of the living organisms and understanding the modelling of evolution by using computer-based approaches.
3) Has the knowledge and ability to identify scientific problems in the field of bioinfomatics and genetics, to design and conduct experiments independently in the laboratory and digital environment, to collect data, analyze, draw conclusions, interpret and present data in oral and written fashion. 2
4) Has the skills of effective communication, planning, and decision making by taking responsibility in individual or teamwork. 2
5) Has the ability to produce output and useful models that offer original, creative and innovative solutions to problems by using inquiring, productive and entrepreneurial features effectively.
6) Has the habitude to examine the field of bioinformatics and genetics or other subjects overlaping with these fields with analytical and critical point of view and to follow them throughout life. 2
7) Has the ability to identify social problems, to create solutions through interdisciplinary cooperation in national and international social and scientific arenas, or be a part of the solution.
8) Has the ability to use software programs and information and communication technologies in data analysis and evaluation, at least at the European Computer License Basic Level.
9) Has the ability to use at least one foreign language orally and in writing at B1 General Level in terms of European Language Portfolio criteria.
10) Has the awareness to respect social, cultural, and individual differences, universal and ethical values, and human rights in the scientific and professional activities that is included. 1

Assessment & Grading

Semester Requirements Number of Activities Level of Contribution
Laboratory 13 % 20
Quizzes 5 % 10
Midterms 1 % 30
Final 1 % 40
total % 100
PERCENTAGE OF SEMESTER WORK % 60
PERCENTAGE OF FINAL WORK % 40
total % 100

Workload and ECTS Credit Calculation

Activities Number of Activities Preparation for the Activity Spent for the Activity Itself Completing the Activity Requirements Workload
Course Hours 13 3 39
Laboratory 13 2 26
Study Hours Out of Class 13 2 26
Midterms 1 15 15
Final 1 20 20
Total Workload 126